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GI Pathology Lab β€” Answer Key

Built from GI Lecture 22 (LOs 1–4). Close notes. Fill from memory. Reveal only after a genuine attempt.

πŸ“– Use alongside: GI Lecture 22 β€” GI Pathology Lab (HoyaDocs) Focus on: Histology by organ (esophagus/stomach/SI/colon) + Pathogenesis of GERD/Barrett's/gastritis/peptic ulcer/H. pylori/IBD + Crohn's vs UC comparison + GI tumors (esophageal SCC/adenoCA, gastric CA, GIST, carcinoid, colorectal CA, FAP).
GI Histology Essentials
Esophageal Pathology
Gastric & SI Pathology
IBD & Colonic Disorders
GI Tumors & Neoplasia
Practice Qs
LO 1
ON EXAM β€” Stratified squamous vs columnar epithelium, villi/crypts, parietal/chief/G cells, goblet cells, Brunner's vs Peyer's patches
Epithelial Lining by Organ (LO1)
OrganEpithelium TypeUnique Feature/Finding
Esophagus
Non-keratinized stratified squamous epithelium
No serosa, mucous glands in submucosa for lubrication
Stomach
Simple columnar mucous epithelium
Rugae (large mucosal folds); parietal cells (HCl) + chief cells (pepsinogen)
Small Intestine
Simple columnar with brush border (microvilli)
Villi (Γ—10 SA increase); crypts of LieberkΓΌhn; lacteals in lamina propria
Colon
Simple columnar (no brush border enzyme activity)
NO villi; straight parallel crypts; abundant goblet cells; taeniae coli→haustra
Stomach Cell Types (LO1)
HCl + intrinsic factor (B12 absorption in terminal ileum)
Pepsinogen (inactive β†’ pepsin at pH <3.5)
Gastrin (released in antrum β†’ ↑ HCl secretion)
Protective mucus in upper gland neck
SI and colon (increase in number from duodenum→ileum)
Defensins + lysozyme (innate immunity); support crypt stem cell niche
Small Intestine Key Features (LO1)
Increase absorptive surface area dramatically (200-300Γ—)
Microvilli on apical surface of enterocytes; site of final digestion/absorption
Tubular glands at base of villi; stem cells renew epithelium q3-5 days; contain Paneth cells
Lymph capillaries in lamina propria; absorb long-chain FA + chylomicrons via thoracic duct
Duodenum ONLY (submucosal); neutralize gastric acid
Ileum ONLY (submucosa); MALT immune surveillance
High-yield: "Brunner's Duodenum, Peyer's Ileum" β€” each confined to ONE segment. Villi = SI only. Straight crypts + abundant goblet cells = colon.
LO 2
ON EXAM β€” GERD histology, Barrett's (goblet cells = metaplasia), infectious esophagitis gross/histo, varices location & complication
GERD & Reflux Esophagitis (LO2)
Incompetent LES β†’ acid reflux β†’ squamous mucosal damage (obesity, fatty foods, alcohol, tobacco, hiatal hernia worsen it)
Basal zone hyperplasia of squamous epithelium, elongated papillae, eosinophilic infiltrate
Barrett's esophagus, stricture, adenocarcinoma
Barrett's Esophagus (LO2)
Metaplasia
Goblet cells (intestinal-type columnar epithelium replaces squamous above GEJ)
30-40Γ— increased risk of esophageal adenocarcinoma
Barrett's β†’ low-grade dysplasia β†’ high-grade dysplasia β†’ adenocarcinoma
Candida vs HSV Esophagitis (LO2)
FeatureCandida EsophagitisHSV Esophagitis
Gross appearance
Tan-yellow pseudomembranes on erythematous mucosa, lower esophagus
Punched-out ulcers with brown-red base, sharply demarcated
Key histology
Fungal pseudohyphae + yeast forms invading superficial mucosa
Ground-glass nuclei (Cowdry type A); multinucleation of squamous cells
Treatment
Fluconazole (systemic antifungal)
Acyclovir
Esophageal Varices (LO2)
Portal hypertension β†’ blood diverted through anastomoses
Linear dark blue dilated submucosal veins
Lower 1/3 (left gastric ↔ esophageal veins anastomoses)
Painless massive hematemesis in cirrhotic patient; can be fatal (20-30% mortality per episode)
Endoscopic band ligation; sclerotherapy/TIPS; propranolol prophylaxis
LO 2
ON EXAM β€” Acute gastritis causes/histology, stress ulcers (Curling vs Cushing), peptic ulcer depth (through muscularis mucosae), H. pylori urease+, celiac villous atrophy
Acute Gastritis & Stress Ulcers (LO2)
Inhibit COX β†’ ↓ prostaglandin β†’ ↓ mucus/bicarb protection
Direct mucosal irritant; disrupts mucosal barrier
Neutrophil infiltration of gastric mucosa
Severe burns (fire β†’ curl up)
↓ plasma volume β†’ mucosal ischemia
CNS injury / ↑ ICP (brain)
Vagal stimulation β†’ ↑ gastric acid secretion (most dangerous, likely to perforate)
Peptic Ulcer Disease (LO2)
Muscularis mucosae into submucosa or deeper (not just erosion)
Duodenum (anterior wall 1st part) > stomach (lesser curvature antrum/body)
Epigastric pain RELIEVED by eating
Epigastric pain WORSENED by eating
Bleeding (melena/hematemesis)
Perforation, obstruction, pancreatic penetration
H. pylori Infection (LO2)
Gram-negative, microaerophilic, urease-positive spiral rod
Urease β†’ NH₃ neutralizes acid; CagA + VacA toxins trigger inflammation
Methylene blue or Giemsa stain (small curved rods in surface epithelial mucus)
95%
PPI + clarithromycin + amoxicillin Γ— 14 days
Adenocarcinoma (intestinal type), gastric MALT lymphoma
Group 1 carcinogen (WHO)
Celiac Disease (LO2)
Gliadin (component of gluten)
HLA-DQ2 or HLA-DQ8 (>95%)
Villous atrophy + crypt hyperplasia + ↑ intraepithelial lymphocytes (IELs)
Anti-tissue transglutaminase (anti-tTG) IgA
Strict gluten-free diet β†’ mucosal recovery
Enteropathy-associated T-cell lymphoma (EATL)
Meckel Diverticulum (LO2)
Persistence of vitelline duct (omphalomesenteric duct)
2 feet from ileocecal valve, ileal side
2%
2 cm
2:1
Gastric mucosa (secretes acid β†’ ulceration of adjacent ileal mucosa)
Painless GI bleeding (dark red stools), obstruction (intussusception), inflammation
LO 3
ON EXAM β€” Crohn's vs UC location/pattern/depth, transmural vs mucosal, skip lesions, crypt abscess, extraintestinal manifestations, complications
Crohn's vs Ulcerative Colitis Comparison (LO3)
FeatureCrohn's DiseaseUlcerative Colitis
Location
Any part mouth-anus; ileocecal junction typical
Colon only; always starts at rectum, extends proximally
Pattern
Skip lesions (normal mucosa intervening)
Continuous inflammation (NO skip lesions)
Depth of inflammation
Transmural (all layers β†’ fistulas)
Mucosal + submucosa only
Cobblestone mucosa
Present (from fissuring ulcers)
Absent
Fistulas
Common (transmural disease)
Rare (mucosal only)
Pseudopolyps
Yes (regenerating mucosa)
Yes (regenerating mucosa)
Crypt abscess
Can occur
Hallmark feature
Cancer risk
Moderate (25Γ— normal)
High (25-40Γ— normal); IBD-CA surveillance
Crohn's Disease Features (LO3)
Granulomas
30-50%
Fistulas, strictures, intra-abdominal abscesses
High (>50% recurrence even after resection)
Ulcerative Colitis Features (LO3)
Crypt abscess + mucosal ulceration (NO granulomas)
Rectum (never spares it)
Rectum only (proctitis) up to entire colon (pancolitis)
Higher than Crohn's
Yes (removes diseased colon = cure of disease)
Extraintestinal Manifestations of IBD (LO3)
Ankylosing spondylitis, sacroiliitis
Peripheral arthritis, erythema nodosum
Uveitis, episcleritis
Erythema nodosum, pyoderma gangrenosum
Primary sclerosing cholangitis (PSC; more with UC)
Nephrolithiasis (↑ oxalate absorption in Crohn's)
LO 4
ON EXAM β€” Esophageal SCC vs adenoCA location, Barrett's adenoCA risk, gastric adenoCA H. pylori, GIST c-KIT mutation, carcinoid 5-HT, colorectal adenoCA sequence (APC/KRAS/TP53), FAP APC gene
Esophageal Tumors (LO4)
TypeLocation in EsophagusRisk FactorsHistology
Squamous Cell Carcinoma (SCC)
Upper/middle 1/3
Smoking + alcohol (synergistic)
Keratin pearls, intercellular bridges
Adenocarcinoma
Lower 1/3 / GEJ
GERD + Barrett's metaplasia
Glandular; arises from Barrett's columnar epithelium
Gastric Tumors (LO4)
70-80%
Signet ring cells (intracellular mucin droplets)
Krukenberg tumor
Sister Mary Joseph nodule
Virchow's node (Troisier sign)
Gastrointestinal Stromal Tumor (GIST) (LO4)
Interstitial cells of Cajal (myenteric pacemaker)
c-KIT (CD117) receptor tyrosine kinase activating mutation
Stomach (60%), then small intestine (30%)
Spindle cells in interlacing bundles
CD117 (c-KIT) + CD34
Desmin (distinguishes from leiomyoma)
Imatinib (Gleevec) β€” tyrosine kinase inhibitor
Carcinoid Tumor (Neuroendocrine) (LO4)
Enterochromaffin/Kulchitsky cells (neuroendocrine cells in gut epithelium)
Serotonin (5-HT) + other vasoactive substances
Appendix (usually benign)
Ileum/small intestine (hepatic metastases)
Uniform nests of small round cells; salt-and-pepper chromatin
Hepatic metastases (serotonin bypasses hepatic first-pass inactivation)
Flushing, diarrhea, wheezing, right-sided valvular heart disease
↑ Urine 5-HIAA (5-hydroxyindoleacetic acid)
Octreotide (somatostatin analog); surgical resection
Colonic Polyps & Colorectal Cancer (LO4)
FeatureTubular AdenomaVillous Adenoma
Architecture
Tubular/round glands; pedunculated (stalk)
Finger-like villous; sessile (broad base)
Malignancy risk
Lower (~5%)
Higher (~40%); villous=villainous
Secretory function
Minimal
Secretes K+-rich mucus β†’ hypokalemia
Size >2 cm significance
↑↑ malignancy risk
Any villous = higher risk
Familial Adenomatous Polyposis (FAP) (LO4)
APC tumor suppressor gene (chromosome 5q21)
Autosomal dominant
Hundreds to thousands of adenomatous polyps
100%
39 years
Total colectomy by age 20-25
FAP + osteomas + desmoid tumors + epidermoid cysts
FAP + brain tumors
Colorectal Adenocarcinoma (LO4)
APC β†’ KRAS β†’ SMAD4/DCC β†’ TP53
~10-15 years (rationale for screening at age 45)
Annular napkin-ring (encircling lumen narrowing)
Obstructive symptoms: constipation, change in stool caliber
Fungating/polypoid growth into lumen
Occult bleeding β†’ iron deficiency anemia
Depth of wall invasion (T), lymph nodes (N), distant mets (M)
CEA (carcinoembryonic antigen); monitor recurrence
Lynch Syndrome (HNPCC) (LO4)
MLH1, MSH2, MSH6, PMS2
Microsatellite instability (MSI-high)
Right-sided colon
Mucinous adenocarcinoma
Better prognosis
Colonoscopy every 1-2 years from age 20-25
Colorectal cancer screening (average risk): Start at age 45 (updated from 50); repeat q10yr if normal. FAP: start age 10-12. Lynch: age 20-25.
Q1 (LO1 β€” Histology). A medical student examines a gastric biopsy showing tall, bright pink pyramidal cells in the fundic glands, each with an abundance of eosinophilic cytoplasm. What is the primary secretory product of these cells?
A. Pepsinogen
B. Hydrochloric acid + Intrinsic factor
C. Gastrin
D. Mucus
B β€” Parietal (oxyntic) cells
These bright pink eosinophilic cells are parietal cells, found primarily in the fundus and body. They secrete both HCl (via H+/K+ ATPase) and intrinsic factor (required for B12 absorption in terminal ileum).
Q2 (LO1 β€” Histology). A 5-year-old presents with severe diarrhea. A small bowel biopsy shows flattened villi, increased intraepithelial lymphocytes, crypt hyperplasia, and absence of a brush border. Which histologic finding is MOST specific for celiac disease?
A. Crypt hyperplasia
B. Villous atrophy
C. Plasma cell infiltration of lamina propria + villous atrophy
D. Increased intraepithelial lymphocytes alone
C β€” Villous atrophy + immune infiltration
While villous atrophy can occur in other conditions (tropical sprue, Whipple's), the combination of villous atrophy with significant plasma cell infiltration of the lamina propria (B cells sensitized to gliadin) is characteristic of celiac disease. Serology (anti-tTG IgA) confirms diagnosis.
Q3 (LO2 β€” Pathogenesis). A 55-year-old with a 20-year history of daily heartburn presents with dysphagia. Endoscopy shows a segment of dark/erythematous mucosa in the distal esophagus, distinct from pale squamous epithelium above. A biopsy reveals columnar epithelium with goblet cells. What is the MOST serious long-term complication of this condition?
A. Esophageal perforation
B. Esophageal stricture
C. Esophageal adenocarcinoma (30-40Γ— increased risk)
D. Acute esophageal variceal bleeding
C β€” Esophageal adenocarcinoma
This patient has Barrett's esophagus (metaplasia: squamous β†’ columnar with goblet cells). The defining histologic feature is goblet cells. While stricture and ulceration are complications of GERD alone, the 30-40Γ— increased risk of adenocarcinoma is the most serious long-term sequela. Regular surveillance is needed.
Q4 (LO2 β€” Pathogenesis). A 28-year-old man presents with epigastric pain relieved by eating, and a biopsy shows chronic inflammation with small curved spiral rods visible on methylene blue staining. The organism produces urease. What is the pathogenic mechanism by which this organism causes mucosal damage?
A. Direct secretion of HCl into the lumen
B. Urease β†’ NH₃ neutralizes gastric acid, allowing bacterial colonization + CagA/VacA toxins trigger inflammation
C. Competition with parietal cells for absorbing B12
D. Inhibition of prostaglandin synthesis
B β€” Urease β†’ NH₃ + toxins
H. pylori uses urease to convert urea β†’ ammonia, neutralizing the acidic environment and allowing survival in gastric mucus. The organism then secretes CagA protein and vacuolating toxin (VacA), triggering chronic inflammatory cascade. This causes chronic gastritis, ulceration, and increased risk of gastric cancer (Group 1 carcinogen).
Q5 (LO2 β€” Pathogenesis). A 32-year-old woman with long-standing GERD is found to have a duodenal ulcer. Which of the following best explains why duodenal ulcers are 10Γ— more common than gastric ulcers despite the duodenum being protected by pancreatic HCO₃⁻?
A. The duodenum lacks protective mucus
B. H. pylori preferentially infects the duodenum, and >95% of duodenal ulcers are H. pylori-associated
C. Duodenal enterocytes cannot secrete HCO₃⁻
D. NSAIDs are more absorbed in the duodenum
B β€” H. pylori association (>95% of DU)
95% of duodenal ulcers are H. pylori-associated (vs 70-80% of gastric ulcers). The gastric antral location of H. pylori leads to increased gastrin release β†’ increased acid secretion β†’ duodenal mucosal damage. Even though the duodenum has HCO₃⁻ protection, chronic hypersecretion overwhelms this defense.
Q6 (LO3 β€” IBD). A 24-year-old male with inflammatory bowel disease presents with right lower quadrant pain, fever, and bloody diarrhea. CT shows a dilated loop of terminal ileum with mesenteric fat stranding. Colonoscopy reveals skip lesions with a cobblestone appearance and deep fissuring ulcers. Biopsy shows transmural inflammation with granulomas. Which extraintestinal manifestation is MOST likely in this patient?
A. Primary sclerosing cholangitis (PSC)
B. Ankylosing spondylitis (HLA-B27+ arthropathy) or peripheral arthritis
C. Erythema nodosum + pyoderma gangrenosum
D. Uveitis + episcleritis
B β€” HLA-B27+ or HLA-B27βˆ’ arthritis
This patient has Crohn's disease (skip lesions, transmural, ileocecal location, granulomas). While PSC is more common in UC, arthritis (both HLA-B27+ ankylosing spondylitis/sacroiliitis and HLA-B27βˆ’ peripheral arthritis) is common in BOTH Crohn's and UC. Erythema nodosum and ocular manifestations also occur, but arthritis is most common.
Q7 (LO3 β€” IBD). A 31-year-old woman with ulcerative colitis spanning the entire colon develops toxic megacolon. Which of the following best explains why total colectomy would be curative for her inflammatory bowel disease?
A. Removal of the colon eliminates the primary source of inflammatory cytokine production
B. UC is confined to the colon β€” removing the diseased organ removes the source of disease (mucosal/submucosal only, NOT transmural)
C. The colon's role in water reabsorption is unnecessary for life
D. Post-colectomy ileostomy normalizes intestinal pH
B β€” UC is confined to colon; mucosal disease only
Ulcerative colitis, by definition, is confined to the colon with MUCOSAL and SUBMUCOSAL inflammation only (NOT transmural like Crohn's). Removing the entire colon eliminates the diseased tissue and cures the disease. In contrast, Crohn's can recur even after surgery (transmural disease can affect any GI segment). Total colectomy is curative for UC.
Q8 (LO4 β€” Tumors). A 58-year-old man presents with painless massive hematemesis. Endoscopy reveals dark blue linear dilated veins in the lower 1/3 of the esophagus. CT shows cirrhosis and portal vein enlargement. What is the PRIMARY mechanism by which portal hypertension causes esophageal varices?
A. Direct invasion of esophageal wall by hepatic cancer cells
B. Increased pressure in the portal system β†’ blood diverted through portosystemic anastomoses (left gastric ↔ esophageal veins) β†’ submucosal venous dilation
C. Splenomegaly compressing the esophageal veins directly
D. Hepatic failure β†’ decreased clotting factors β†’ spontaneous esophageal bleeding
B β€” Portal HTN diverts blood through anastomoses
Portal hypertension (from cirrhosis, thrombosis, etc.) increases pressure in the portal system. Blood is diverted through portosystemic anastomoses, including the left gastric vein ↔ esophageal veins. This causes submucosal esophageal veins to dilate (varices). Varices are painless until they rupture (massive hemorrhage).